BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032H07LP1|AL429646
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1536 1648 0.0
>3x_Contig1536
Length = 11572
Score = 1648 bits (830), Expect = 0.0
Identities = 839/842 (99%), Gaps = 1/842 (0%)
Strand = Plus / Plus
Query: 1 gatccatttctttaacacatcaaagaagaaagcaactctgtccaaaacctttccttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 gatccatttctttaacacatcaaagaagaaagcaactctgtccaaaacctttccttcttt 3758
Query: 61 ctctaatgcaattttgcttatctctacatgtgtatcatgcttgtgaa-ccacctcaaaac 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3759 ctctaatgcaattttgcttatctctacatgtgtatcatgcttgtgaaaccacctcaaaac 3818
Query: 120 agccgtttccgcctctgagataaattttgtagacgtaccagttggttctccgataagtgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 agccgtttccgcctctgagataaattttgtagacgtaccagttggttctccgataagtgg 3878
Query: 180 tcttatcatctttgttggaaagaaaccatgcactcccactattaagaccttcacaggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 tcttatcatctttgttggaaagaaaccatgcactcccactattaagaccttcacaggttt 3938
Query: 240 ggttttcccttctgaaagcttattcaaggatatttgtgggtttcttctatacaacgaatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 ggttttcccttctgaaagcttattcaaggatatttgtgggtttcttctatacaacgaatt 3998
Query: 300 tggtgtagagtctttggrtttgttggtatcccataatattccgagtttcgtaatttgggc 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3999 tggtgtagagtctttggatttgttggtatcccataatattccgagtttcgtaatttgggc 4058
Query: 360 atatattgacgtaataatcgaagatttaggcaaagattggraaccaggaaccaagaggtt 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4059 atatattgacgtaataatcgaagatttaggcaaagattggaaaccaggaaccaagaggtt 4118
Query: 420 cagattgtgaccatgagcttcatttgagtttaacgtattcgtctccttagaggtctgctc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4119 cagattgtgaccatgagcttcatttgagtttaacgtattcgtctccttagaggtctgctc 4178
Query: 480 ttcggattttgctttgaataatatggcatcatatgattctcctggtaatagagcatttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4179 ttcggattttgctttgaataatatggcatcatatgattctcctggtaatagagcatttga 4238
Query: 540 agtcaatatggagttcttattccgtaacacttcctttgcttcatccttcttgttccaaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4239 agtcaatatggagttcttattccgtaacacttcctttgcttcatccttcttgttccaaaa 4298
Query: 600 gagccaaggagttttcgagttcgatgcctggtctgtggcatcattgttgtctttcgacga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4299 gagccaaggagttttcgagttcgatgcctggtctgtggcatcattgttgtctttcgacga 4358
Query: 660 aggcgaagttgtccgattgatagtagatgacttctgatcatctgattgtacactctcgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4359 aggcgaagttgtccgattgatagtagatgacttctgatcatctgattgtacactctcgtt 4418
Query: 720 tccattctgctctttacttcctaaacccattgaagcaaaagacggtttccgccaccaaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4419 tccattctgctctttacttcctaaacccattgaagcaaaagacggtttccgccaccaaga 4478
Query: 780 tctttgcgtttgatccgcagaacccacttctgtttccctcttggcattccacactgacca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4479 tctttgcgtttgatccgcagaacccacttctgtttccctcttggcattccacactgacca 4538
Query: 840 ag 841
||
Sbjct: 4539 ag 4540
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5967
Number of Sequences: 1807
Number of extensions: 5967
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)